Submitted by Tanya L. Leise on Tuesday, 9/11/2018, at 1:42 PM

Asterisks mark Amherst College undergraduate co-authors.

Recent Refereed Research Publications

D. Liu, A. Stowie, N. de Zavalia, T. Leise, S. Pathak, L. Drewes, A. Davidson, S. Amir, N. Sonenberg, and R. Cao (2018). mTOR signaling in VIP neurons regulates circadian clock synchrony and olfaction, PNAS .

E. Winnebeck, D. Fischer, T. Leise, and T. Roenneberg (2018). Dynamics and ultradian structure of human sleep in real life, Current Biology 28:49-59.

A. Cohen, T. Leise, and N. Kang* (2017). Multi-attribute, multi-alternative models of choice: Choice, reaction time, and process tracing, Cognitive Psychology 98:45-72.

T. Noguchi, T. Leise, N. Kingsbury, T. Diemer, L. Wang, M. Henson, and D. Welsh (2017). Calcium Circadian Rhythmicity in the Suprachiasmatic Nucleus: Cell Autonomy and Network Modulation, eNeuro 7 August 2017, ENEURO.0160-17.2017.

T. Leise (2017). Analysis of nonstationary time series for biological rhythms research, Journal of Biological Rhythms 32:187-194.

A. Azzi, J. Evans, T. Leise, J. Myung, T. Takumi, A. Davidson, and S.A. Brown (2017). Network Dynamics Mediate Circadian Clock Plasticity, Neuron 93:441-450.

H. Jansen, T. Leise, G. Stenhouse, K. Pigeon, W. Kasworm, J. Teisberg, T. Radandt, R. Dallmann, S. Brown, and C.T. Robbins (2016). The bear circadian clock doesn’t ‘sleep’ during winter dormancy, Frontiers in Zoology 13:42.

L. Roberts, T. Leise, and T. Holmes (2016). Functional contributions of strong and weak oscillators to synchrony and light-shifted phase dynamics, Journal of Biological Rhythms 31:337-51.

J. Evans, T. Leise, O. Castanon-Cervantes, A. Davidson (2015). Neural correlates of individual differences in circadian behaviour, Proc. R. Soc. B 282:20150769.

J. Evans, T-C. Suen, B. Callif, A. Mitchell, O. Castanon-Cervantes, K. Baker, I. Kloehn, K. Baba, B. Teubner, J.Ehlen, K. Paul, T. Bartness, G. Tosini, T. Leise, and A. Davidson (2015). Shell neurons of the master circadian clock coordinate the phase of tissue clocks throughout the brain and body,BMC Biology 13:43.

L. Roberts, T. Leise, T. Noguchi, D. Welsh, and T. Holmes (2015). Light evokes rapid circadian network oscillator desynchrony followed by gradual phase retuning of synchrony, Current Biology 25:858-67.

E. Manoogian, T. Leise, and E. Bittman (2015). Phase resetting in duper hamsters: Specificity to photic zeitgebers and circadian phase, to appear in Journal of Biological Rhythms.

C.J. Guenthner, M.E. Luitje, L.A. Pyle, P.C. Molyneux, J.K. Yu*, A.S. Li*, T.L. Leise, and M. Harrington (2014). Circadian rhythms of PER2::LUC in individual primary mouse hepatocytes and cultures, PLoS ONE 9:e87573.

J. Evans, T. Leise, O. Castanon-Cervantes, A. Davidson (2013). Dynamic interactions mediated by non-redundant signaling mechanisms couple circadian clock neurons, Neuron 80:973-83.

T. Leise (2013). Wavelet analysis of circadian and ultradian behavioral rhythms, Journal of Circadian Rhythms 11:Article 5.

T. Leise, M. Harrington, P. Molyneux, I. Song, H. Queenan, E. Zimmerman, G. Lall, and S. Biello (2013). Voluntary exercise can strengthen the circadian system in aged mice, AGE 35:2137-52.

T. Leise, P. Indic, M.J. Paul, and W.J. Schwartz (2013). Wavelet meets actogram, Journal of Biological Rhythms 28:62-68.

A. Cohen, T. Leise, and D. K. Welsh (2012).  Bayesian statistical analysis of circadian time series, Journal of Theoretical Biology 314:182-191.

M. Sellix, J. Evans, T. Leise, O. Castanon-Cervantes, D. Hill, P. DeLisser, G. Block, M. Menaker, and A. Davidson (2012). Aging differentially affects the re-entrainment response of central and peripheral circadian oscillators, Journal of Neuroscience 32:16193-16202.

T. Leise, C. Wang, P. Gitis, and D. K. Welsh (2012).  Persistent Cell-Autonomous Circadian Oscillations in Fibroblasts Revealed by Six-Week Single-Cell Imaging of PER2::LUC Bioluminescence, PLoS ONE 7(3): e33334.

T. Leise and M.E. Harrington (2011). Wavelet-based time series analysis of circadian rhythms, Journal of Biological Rhythms 26:454-463.

J. A. Evans, T. Leise, O. Castanon-Cervantes, A. Davidson (2011).  Intrinsic regulation of spatiotemporal organization within the suprachiasmatic nucleus, PLoS ONE 6:e15869.

T. Leise, J. R. Walton, and Y. Gorb (2010). A boundary integral method for a dynamic, transient mode I crack problem with viscoelastic cohesive zone, Int. J. Fracture 162:69-76.

A.J. Davidson, O. Castanon-Cervantes, T. Leise, P. Molyneux, and M. Harrington (2009; Epub 2008). Visualizing jet lag in the mouse suprachiasmatic nucleus and peripheral circadian timing system, European Journal of Neuroscience 29(1):171-180.

T. Leise, J. R. Walton, and Y. Gorb (2008).  Reconsidering the boundary conditions for a dynamic, transient mode I crack problem, Journal of Mechanics of Materials and Structures 3(9):1797-1807.

T. Leise and E. Moin* (2007).  A mathematical model of the Drosophila circadian clock with emphasis on post-translational mechanisms, Journal of Theoretical Biology 28:48-63.

T. Leise and Hava Siegelmann (2006).  Dynamics of a multistage circadian system, Journal of Biological Rhythms 21(4):314-323.

Other Refereed Publications

K. Bryan and T. Leise (2013).  Making do with less: An introduction to compressed sensing, SIAM Review 55(3):547-566.

K. Bryan and T. Leise (2010).  Impedance imaging, inverse problems, and Harry Potter’s cloak, SIAM Review 52(2):359-377.

M. Catalano, T. Leise, and T. Pfaff (2009).  Measuring energy inequity: Integration and the Gini coefficient, Numeracy 2(2):Article 4.

T. Leise and Andrew L. Cohen (2007).  Nonlinear oscillators at our fingertips, American Mathematical Monthly 114(1):14-28.

T. Leise (2007). As the planimeter’s wheel rolls, The College Mathematics Journal 38(1):24-31.

K. Bryan and T. Leise (2006).  The $25,000,000,000 eigenvector: the linear algebra behind Google, SIAM Review 48(3):569-581.

Invited Publications

T. Leise (2015). Wavelet-based analysis of circadian behavioral rhythms. In: Seghal, Amita (editor), Circadian Rhythms and Biological Clocks: Methods in Enzymology Volume 551, Academic Press.

K. Bryan and T. Leise (2013). Cloaking. In: Higham, Nick (editor), The Princeton Companion to Applied Mathematics, Princeton University Press.

E. Bittman and T. Leise (2009).  Multi-oscillatory circadian systems.  In: Binder, M.D., Hirokawa, N., Windhorst, U. (eds), Encyclopedia of Neuroscience, Springer, Berlin.